MRIQC: individual bold report

Summary

  • BIDS filename: sub-6036_ses-1_task-rest_bold.
  • Date and time: 2023-08-11, 15:27.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.00015498178506375226
aqi0.03521237030965391
dummy_trs2
dvarsnstd73.47735990743841
dvarsstd1.1495311782041926
dvarsvstd0.9980792512670913
efc0.5409621497261554
fber1789.7799072265625
fdmean0.13241578118372582
fdnum238
fdperc21.67577413479053
fwhmavg2.205648333333333
fwhmx2.165305
fwhmy2.38495
fwhmz2.06669
gcor0.00354765
gsrx-0.01944136992096901
gsry0.059436339884996414
sizet1098
sizex104
sizey96
sizez64
snr5.84331830294324
spacingtr0.5550000071525574
spacingx2.0
spacingy2.0
spacingz2.0
summarybgk18.500076072200166
summarybgmad10.45518153912101
summarybgmean27.295522689819336
summarybgmedian9.226776123046875
summarybgn426407.0
summarybgp051.7340619564056396
summarybgp95114.16966857910117
summarybgstdv44.20469284057617
summaryfgk0.7880889070691945
summaryfgmad65.1412920304415
summaryfgmean397.789794921875
summaryfgmedian392.69488525390625
summaryfgn128041.0
summaryfgp05301.6448059082031
summaryfgp95513.5382690429688
summaryfgstdv67.20382690429688
tsnr23.04378189216368
AcquisitionDuration618.467
AcquisitionMatrixPE96
AcquisitionNumber1
AcquisitionTime13:38:49.225000
BandwidthPerPixelPhaseEncode17.361
BaseResolution104
BodyPartExaminedBRAIN
CoilCombinationMethodSum of Squares
CoilStringHeadNeck_64
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20220720
Dcm2bidsVersion2.1.7
DerivedVendorReportedEchoSpacing0.000600004
DeviceSerialNumber67034
DwellTime2.1e-06
EchoTime0.022
EchoTrainLength72
EffectiveEchoSpacing0.000600004
FlipAngle47
ImageCommentsProject:earlypsychosis, Unaliased MB8/PE3
ImageOrientationPatientDICOM[0.999953, 0.00063871, 0.00972506, -5.33014e-08, 0.997851, -0.0655301]
ImageType['ORIGINAL', 'PRIMARY', 'FMRI', 'NONE']
ImageTypeText['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'NORM']
ImagingFrequency123.262
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
MRAcquisitionType2D
MTStateTrue
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNameMAGNETOM Prisma Fit
MatrixCoilModeSENSE
ModalityMR
MultibandAccelerationFactor8
NonlinearGradientCorrectionTrue
PartialFourier0.75
PartialFourierDirectionPHASE
PatientPositionHFS
PercentPhaseFOV92.3077
PercentSampling100
PhaseEncodingDirectionj
PhaseResolution1
PixelBandwidth2289
ProtocolNameMb8_rest_HCP_22_64_555_2mmiso
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
PulseSequenceNameepfid2d1_96
ReceiveCoilActiveElementsHC1-6
ReceiveCoilNameHeadNeck_64
ReconMatrixPE96
RepetitionTime0.555
ScanOptionsPFP\FS
ScanningSequenceEP
SequenceVariantSK\SS
SeriesDescriptionMb8_rest_HCP_22_64_555_2mmiso
SeriesNumber5
ShimSetting[2642, 5310, -7394, 510, 6, -624, -89, -234]
SliceThickness2
SliceTiming[0, 0.0675, 0.135, 0.2025, 0.2675, 0.335, 0.4025, 0.47, 0, 0.0675, 0.135, 0.2025, 0.2675, 0.335, 0.4025, 0.47, 0, 0.0675, 0.135, 0.2025, 0.2675, 0.335, 0.4025, 0.47, 0, 0.0675, 0.135, 0.2025, 0.2675, 0.335, 0.4025, 0.47, 0, 0.0675, 0.135, 0.2025, 0.2675, 0.335, 0.4025, 0.47, 0, 0.0675, 0.135, 0.2025, 0.2675, 0.335, 0.4025, 0.47, 0, 0.0675, 0.135, 0.2025, 0.2675, 0.335, 0.4025, 0.47, 0, 0.0675, 0.135, 0.2025, 0.2675, 0.335, 0.4025, 0.47]
SoftwareVersionssyngo MR XA30
SpacingBetweenSlices2
StationNameMRC35427
TaskNameRest
TotalReadoutTime0.0570004
TxRefAmp272.925
WipMemBlock2f0318a9-998c-43a6-9b47-84e61c318b6a||Sequence: R017 nxva30a/master r/e4e260217; Mar 27 2023 19:45:08 by eja
md5sumb5451372c30813ed22156c1305338e67
softwaremriqc
version0.16.1
Rate Image
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.